DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and YPT32

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_011305.1 Gene:YPT32 / 852662 SGDID:S000003178 Length:222 Species:Saccharomyces cerevisiae


Alignment Length:214 Identity:89/214 - (41%)
Similarity:131/214 - (61%) Gaps:4/214 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.||||.::|||:|||||.||.:||...|......||||||..|.|.::.|:||.|||||||||.
Yeast    10 YDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQER 74

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            :|:||.:|||||.|||:||||::..::.:...||.:.|::::.|:.:.||||||||...|.|..:
Yeast    75 YRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTD 139

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197
            |.:.||.|:.::|.||||..:.||::||......|::.:.:...|::..... .:|...:|..|:
Yeast   140 EAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGTN-NMGSNGAPKGPT 203

  Fly   198 L---PGAGGAAGAANSGCC 213
            :   |.........:|.||
Yeast   204 ISLTPAPKEDKKKKSSNCC 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 87/212 (41%)
YPT32NP_011305.1 Rab11_like 11..175 CDD:206660 79/163 (48%)

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