DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and RABH1e

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_196588.3 Gene:RABH1e / 830890 AraportID:AT5G10260 Length:207 Species:Arabidopsis thaliana


Alignment Length:189 Identity:68/189 - (35%)
Similarity:120/189 - (63%) Gaps:11/189 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSI 71
            :|.:.:||..|||:.::.:|...:|...:..|||::|.::.:.::.:.::||:|||||||.|||:
plant    10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 74

  Fly    72 TRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKEEGEA 136
            ..||.|.::.|::|||:..|::|.:.:.|:||.|....|:::|:|:|||:||..:|:|..|||:.
plant    75 IPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDN 139

  Fly   137 FAREHGLVFMETSARTAANVEEAFINTA------KEIYEKIQEGVFDIN-----NEANG 184
            .||::|::|:||||:...|::..|...|      :.:....||.:.|:|     |.|.|
plant   140 KARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKTSSNSAQG 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 68/189 (36%)
RABH1eNP_196588.3 Rab6 10..170 CDD:206654 61/159 (38%)

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