DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and RABG3A

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001154217.1 Gene:RABG3A / 826558 AraportID:AT4G09720 Length:217 Species:Arabidopsis thaliana


Alignment Length:207 Identity:74/207 - (35%)
Similarity:113/207 - (54%) Gaps:30/207 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
            |.|.|::||:||||:.|:.|:..|:|...:..|||.:|..:.:.|..|.:.||||||||||.|:|
plant     8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQS 72

  Fly    71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSNM--------------VIMLIGNK 120
            :..::||||....||||:....:|::|.||.|: .:|..|..|              ..:::|||
plant    73 LGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAEASPSDPKTFPFIVLGNK 137

  Fly   121 SDLD--SRREVKKEEGEAFAREHG-LVFMETSARTAANVEEAFINTAK---------EIY-EKIQ 172
            .|:|  |.|.|..::...:...:| :.:.||||:...||:|||:..||         :|| :.|.
plant   138 IDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQDIYFQGIP 202

  Fly   173 EGVFDINNEANG 184
            :.|.:  ||..|
plant   203 DAVTE--NEPKG 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 74/207 (36%)
RABG3ANP_001154217.1 Rab7 9..193 CDD:206655 66/183 (36%)

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