DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and RAB7B

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_188512.1 Gene:RAB7B / 821415 AraportID:AT3G18820 Length:206 Species:Arabidopsis thaliana


Alignment Length:214 Identity:73/214 - (34%)
Similarity:114/214 - (53%) Gaps:24/214 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
            |.|.||:||:||||:.|:.|:.:|:|...:..|||.:|..:.:..:.:...||||||||||.|:|
plant     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQS 72

  Fly    71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLED----ARQHSNSNMVIMLIGNKSDLD--SRREV 129
            :..::||||...:||||:...::|.:|..|.|:    |......|...:|||||.|:|  :.|.|
plant    73 LGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVV 137

  Fly   130 KKEEGEAFAREHG-LVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSP 193
            .:::.:|:....| :.:.||||:...||||||...||:                 .:|.|::...
plant   138 SEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKD-----------------ALKSGEEEEL 185

  Fly   194 TNPSLPGAGGAAGAANSGC 212
            ..|.....|.:....::||
plant   186 YLPDTIDVGTSNQQRSTGC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 73/214 (34%)
RAB7BNP_188512.1 Rab7 9..182 CDD:206655 68/189 (36%)

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