DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and RABE1e

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_187601.1 Gene:RABE1e / 820148 AraportID:AT3G09900 Length:218 Species:Arabidopsis thaliana


Alignment Length:212 Identity:99/212 - (46%)
Similarity:143/212 - (67%) Gaps:9/212 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.||.|.::|||:|||||||||:|:|..|......|||::|..|.:.:|||:||||||||||||.
plant    12 YDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQER 76

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD-SRREVKK 131
            ||:||.:|||||.|.|||||:|...:||::..|:::..||::.::..:|:|||:|:| |:|.|..
plant    77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADMDESKRAVPT 141

  Fly   132 EEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNP 196
            .:|:|.|.|:|:.|.||||:|..|||:.|::.||:|.:::.|.  |...|..||||.:|.:..  
plant   142 SKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTES--DTKAEPQGIKITKQDANK-- 202

  Fly   197 SLPGAGGAAGAANSGCC 213
                |..::....|.||
plant   203 ----ASSSSTNEKSACC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 97/210 (46%)
RABE1eNP_187601.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 86/166 (52%)

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