DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab12

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_002937521.2 Gene:rab12 / 779581 XenbaseID:XB-GENE-492791 Length:248 Species:Xenopus tropicalis


Alignment Length:197 Identity:79/197 - (40%)
Similarity:123/197 - (62%) Gaps:4/197 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFR 69
            :..:.||||..||||:.|:.:|||..|......|:||:|..:.:.:.||:|:||||||||||.|.
 Frog    45 FKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFN 109

  Fly    70 SITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKEEG 134
            |||.:|||.|.|.:||||||::|||..|..|::...::::....::|:|||.|.::.||:.:::|
 Frog   110 SITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETDREITRQQG 174

  Fly   135 EAFARE-HGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNE-ANGIKIGQQHSPTNPS 197
            |.||:: .|:.|.|.||:...||:|.|:....:|.:|:...:  :.:| :|.|...|......|.
 Frog   175 EKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDL--VRSELSNSILSLQPEPEVPPE 237

  Fly   198 LP 199
            ||
 Frog   238 LP 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 79/197 (40%)
rab12XP_002937521.2 P-loop containing Nucleoside Triphosphate Hydrolases 47..248 CDD:476819 79/195 (41%)

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