DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and Rab43

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001034483.1 Gene:Rab43 / 69834 MGIID:1917084 Length:210 Species:Mus musculus


Alignment Length:166 Identity:82/166 - (49%)
Similarity:115/166 - (69%) Gaps:1/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.:|||.:::||..|||:|::.:|....|......||||:|..:.:.|.||::|||||||||||.
Mouse    13 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 77

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ||:||:||||.|.||:|.|||::|.||..:..|:||.|:::.||:|.:||||||||...|||...
Mouse    78 FRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLA 142

  Fly   133 EGEAFAREHG-LVFMETSARTAANVEEAFINTAKEI 167
            |.::.|..:. |..:||||:.::||||||...|.|:
Mouse   143 EAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 82/166 (49%)
Rab43NP_001034483.1 Rab19 14..178 CDD:133267 80/163 (49%)
Effector region. /evidence=ECO:0000250 45..53 4/7 (57%)

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