DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and Rab13

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_080953.1 Gene:Rab13 / 68328 MGIID:1927232 Length:202 Species:Mus musculus


Alignment Length:202 Identity:84/202 - (41%)
Similarity:139/202 - (68%) Gaps:17/202 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
            :|.:|||.::|||:||||:||:::|.:..|...:..|||::|..|.:.|:||:||||:|||||||
Mouse     4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQE 68

  Fly    67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKK 131
            .|::||.:|||||.|.:||||||..::|.::..|::..::::::.:..:|:|||.|::::|:|::
Mouse    69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQR 133

  Fly   132 EEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNP 196
            |:.|..||||.:.|.||||:::.||:|||.:.|::|.                :|.|.:.|.|| 
Mouse   134 EQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDIL----------------LKTGGRRSGTN- 181

  Fly   197 SLPGAGG 203
            |.|.:.|
Mouse   182 SKPSSTG 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 84/202 (42%)
Rab13NP_080953.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 75/181 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 11/16 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..202 7/16 (44%)

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