DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab18

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001017281.1 Gene:rab18 / 550035 XenbaseID:XB-GENE-489852 Length:206 Species:Xenopus tropicalis


Alignment Length:209 Identity:93/209 - (44%)
Similarity:132/209 - (63%) Gaps:18/209 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSIT 72
            |.:|||::|||||.|||:|||..|.|....||||:|..:.|::||.:.||.||||||||.||::|
 Frog    10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLT 74

  Fly    73 RSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVI-MLIGNKSDLDSRREVKKEEGEA 136
            .||||||.|.:||||:|||:||..|..||.:...:...|.:: ||:|||.|.:: |||.:.||..
 Frog    75 PSYYRGAQGVILVYDVTRRDTFTRLDNWLNELETYCTRNDIVKMLVGNKIDKEN-REVDRNEGLK 138

  Fly   137 FAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQE--GVFDINNEANGIKIGQQHSPTNPSLP 199
            |||:|.::|:|.||:|...|:.||    :|:.|||.:  |:::......|:::..:.        
 Frog   139 FARKHSMLFIEASAKTRDGVQCAF----EELVEKIIQTPGLWESETNNRGVRLSNED-------- 191

  Fly   200 GAGGAAGAANSGCC 213
              ||..|.:.||.|
 Frog   192 --GGGRGGSCSGYC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 92/207 (44%)
rab18NP_001017281.1 Rab18 9..169 CDD:206656 83/163 (51%)

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