DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab19

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001017246.1 Gene:rab19 / 550000 XenbaseID:XB-GENE-495128 Length:213 Species:Xenopus tropicalis


Alignment Length:194 Identity:85/194 - (43%)
Similarity:128/194 - (65%) Gaps:14/194 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            :.:|||.|:|||:.|||:|::.:|....|......||||:|..|.:.|:||::|:|:|||||||.
 Frog    12 FDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQER 76

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ||:||:||||.|.||::.||||||::|..:..|:.:|.::..:|:::|||||||||..:|::..|
 Frog    77 FRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFE 141

  Fly   133 EGEAFAREHGLV-FMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTN 195
            |....|.:|||: .:||||:.:.||:|.|:..|||:   |....|..::|          ||.|
 Frog   142 EACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKEL---IARNTFHYHSE----------SPRN 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 85/194 (44%)
rab19NP_001017246.1 Rab19 13..177 CDD:133267 78/163 (48%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 37..52 5/14 (36%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 72..87 11/14 (79%)

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