DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and Rab25

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_058595.2 Gene:Rab25 / 53868 MGIID:1858203 Length:213 Species:Mus musculus


Alignment Length:219 Identity:91/219 - (41%)
Similarity:128/219 - (58%) Gaps:25/219 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
            |.::||.::||::||||:.||.:||...|.  ||  .||||||..|.:.:....:|.|||||||.
Mouse     9 YNFVFKVVLIGESGVGKTNLLSRFTRNEFS--HDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGL 71

  Fly    66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVK 130
            |.:|:||.:|||||.|||||:|:|:.:|:..:..||::...|:.:.:|:||:||||||...|||.
Mouse    72 ERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136

  Fly   131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTN 195
            .||...||..:||:|:||||..:.|||.||....|||:.|:.:               |:.:.|.
Mouse   137 TEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSK---------------QKQNSTR 186

  Fly   196 PSLPGAGGAAGAANSG------CC 213
            .|....|.|....:.|      ||
Mouse   187 TSAITLGNAQAGQDPGPGEKRACC 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 89/217 (41%)
Rab25NP_058595.2 Rab11_like 11..174 CDD:206660 80/164 (49%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 35..49 7/15 (47%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 67..84 10/16 (63%)

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