DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab35b

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001003548.1 Gene:rab35b / 445154 ZFINID:ZDB-GENE-040801-62 Length:201 Species:Danio rerio


Alignment Length:178 Identity:77/178 - (43%)
Similarity:115/178 - (64%) Gaps:8/178 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.:|||.:||||:|||||.|||:|.|..|...:..||||:|..|.:.::|:::|||||||||||.
Zfish     5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTAGQER 69

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ||:||.:||||..|.::|||:|..|:|.::..||.:..|:.: ::..:|:|||:|..:.:.|:..
Zfish    70 FRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPNSKVVETN 133

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAF-------INTAKEIYEKIQE 173
            :.:.||.:.|:...||||:...||||.|       :...||...|.|:
Zfish   134 DAQKFAEQMGISLFETSAKENVNVEEMFNCITELVLRAKKESVAKQQQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 77/178 (43%)
rab35bNP_001003548.1 P-loop containing Nucleoside Triphosphate Hydrolases 3..201 CDD:476819 77/178 (43%)

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