DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab2 and rab11bb

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001002555.1 Gene:rab11bb / 436828 ZFINID:ZDB-GENE-040718-293 Length:218 Species:Danio rerio


Alignment Length:171 Identity:93/171 - (54%)
Similarity:120/171 - (70%) Gaps:0/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.:|||.::|||:|||||.||.:||...|......||||||..|.|.:|||.||.|||||||||.
Zfish     8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            :|:||.:|||||.||||||||.:..|:.::..||::.|.|:::|:||||:||||||...|.|..:
Zfish    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTD 137

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQE 173
            |..|||.::.|.|:||||..:.||||||.|...|||..:.:
Zfish   138 EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 93/171 (54%)
rab11bbNP_001002555.1 Rab11_like 9..173 CDD:206660 90/163 (55%)

Return to query results.
Submit another query.