DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab-11.2

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001251691.1 Gene:rab-11.2 / 4363014 WormBaseID:WBGene00004275 Length:198 Species:Caenorhabditis elegans


Alignment Length:211 Identity:92/211 - (43%)
Similarity:124/211 - (58%) Gaps:19/211 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.||||.::||:.|||||.||.:||...|......||||||..::|:::||.:|:|||||||.|.
 Worm     5 YYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMER 69

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ||....||||||.||||||||::.:|:..:..||:..|.|:|.::||.|:||||||.  ..|..:
 Worm    70 FRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS--HAVPTD 132

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197
            |.:.:|..:.:.|:||||....|||.||.|...|||:.:.|...|             ||.|  .
 Worm   133 EAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEKYKD-------------HSGT--I 182

  Fly   198 LPGAGGAAGAANSGCC 213
            :|..  |:....:.||
 Worm   183 IPST--ASNTPKNQCC 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 90/209 (43%)
rab-11.2NP_001251691.1 Rab11_like 7..168 CDD:206660 80/162 (49%)

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