DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and dnajc27

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001007163.1 Gene:dnajc27 / 402784 ZFINID:ZDB-GENE-081022-93 Length:273 Species:Danio rerio


Alignment Length:172 Identity:57/172 - (33%)
Similarity:98/172 - (56%) Gaps:5/172 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSIT 72
            |.|.:|:..|||||::.::.:|||.|.:..|||:::|...:.:..::||:.|:|.||...|..:.
Zfish    18 KVISLGNAEVGKSCIIKRYCEKRFVPKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVR 82

  Fly    73 RSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNS-----NMVIMLIGNKSDLDSRREVKKE 132
            ..:|:.:.|.:||||:..||:|:.|.:||.:.:|...|     |::.::..||.||..||.|.:.
Zfish    83 NEFYKDSQGVILVYDVGLRESFDALDSWLTEMKQEMGSQANMENIIFVVCANKVDLTKRRVVDES 147

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEG 174
            ||..:|...|..:.||||::...:.|.|.:....|.:..:.|
Zfish   148 EGRLWAESRGFHYFETSAQSGEGINEMFQSFFSSITDMCENG 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 57/172 (33%)
dnajc27NP_001007163.1 RJL 17..184 CDD:133319 56/165 (34%)
DnaJ 217..264 CDD:99751
Blue background indicates that the domain is not in the aligned region.

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