Protein Alignment Rab2 and RabX5

DIOPT Version :9

• Sequence 1: NP_001260732.1
• Gene: Rab2 / 35577
• FlyBaseID: FBgn0014009
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_647644.2
• Gene: RabX5 / 38209
• FlyBaseID: FBgn0035255
• Length: 277
• Species: Drosophila melanogaster
• Alignment Length: 216
• Identity: 67/216 - (31%)
• Similarity: 102/216 - (47%)
• Gaps: 17/216 - (7%)

  Fly     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSIT 72
            |.|.:||..|||:.::.:|...:||..:..||||:|.....:|.|....|::|||||||.||.|.
  Fly    66 KVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGHNYSLEMWDTAGQERFRCIA 130

  Fly    73 RSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNM-VIMLIGNKSDLDSRREVKKEEGEA 136
            .:|||.|:..::.||::::::......||..|..::.|.. ::.|:|.|:||.|:.|..:.|..|
  Fly   131 GAYYRNASVIVVTYDMSKKDSLESAKKWLNSALNYNASKRPLVFLVGTKADLLSKEEFVRMERLA 195

  Fly   137 --FAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPSLP 199
              .|.|....:...|||:...|.|.|...|...:|:.      :..|...||...|...|..|:.
  Fly   196 GLAAAELQAEYWSVSARSGFKVTELFQRIAALAFEEA------VMQEIRSIKNKPQEQATQASVK 254

  Fly   200 GA--------GGAAGAANSGC 212
            ..        |.......|||
  Fly   255 SQTFDLRNFFGSRLSQQKSGC 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab2	NP_001260732.1	PLN03108	1..213	CDD:178655	67/216 (31%)
RabX5	NP_647644.2	P-loop_NTPase	66..230	CDD:304359	56/163 (34%)
		RAB	66..225	CDD:197555	55/158 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454221
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930