DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab18a

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_996661.1 Gene:rab18a / 325255 ZFINID:ZDB-GENE-030131-3980 Length:205 Species:Danio rerio


Alignment Length:200 Identity:92/200 - (46%)
Similarity:132/200 - (66%) Gaps:12/200 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSIT 72
            |.:|||::|||||.|||:|||..|......||||:|..:.:.:||.:.||.||||||||.||::|
Zfish    10 KILIIGESGVGKSSLLLRFTDDTFDAEIGATIGVDFKVKTLAVDGNRAKLAIWDTAGQERFRTLT 74

  Fly    73 RSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLDSRREVKKEEGEA 136
            .||||||.|.:||||::|||||..|..||.:...:...| :|.||:|||.|.|. ||:::|||..
Zfish    75 PSYYRGAQGVILVYDVSRRETFAKLDNWLSELETYCTRNDLVKMLVGNKIDKDD-REIEREEGLK 138

  Fly   137 FAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQE--GVFDINNEANGIKIGQQHSPTNPSLP 199
            |||:|.::|:|:||:|...|:.||    :|:.|||.:  |:::..:::.|:.:    |..:.|..
Zfish   139 FARKHSMLFIESSAKTRDGVQCAF----EELVEKILQTPGLWESMHKSRGVAL----SELSESSQ 195

  Fly   200 GAGGA 204
            |..||
Zfish   196 GGCGA 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 91/199 (46%)
rab18aNP_996661.1 Rab18 9..169 CDD:206656 83/163 (51%)

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