DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and Rab15

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_942044.1 Gene:Rab15 / 299156 RGDID:735172 Length:212 Species:Rattus norvegicus


Alignment Length:210 Identity:78/210 - (37%)
Similarity:127/210 - (60%) Gaps:22/210 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |..||:.::|||:||||:|||.:|||..|...|..||||:|..:.|.:||.::::|||||||||.
  Rat     5 YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQER 69

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            :::||:.|||.|.|..|||||:...::.|:..|:.|..:::...:..:|||||:|.:.:|:|.:|
  Rat    70 YQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGRE 134

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKI---------- 187
            :|:..|:|:|:.|.||||.|..|::|:|....:.:.:..::       |.:|::.          
  Rat   135 QGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRK-------ELDGLRTCASNELALAE 192

  Fly   188 -----GQQHSPTNPS 197
                 |:...|.|.|
  Rat   193 LEEDEGKTEGPANSS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 78/210 (37%)
Rab15NP_942044.1 Rab15 9..172 CDD:206698 70/162 (43%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 10/16 (63%)

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