DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab-10

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_491857.1 Gene:rab-10 / 266836 WormBaseID:WBGene00004273 Length:201 Species:Caenorhabditis elegans


Alignment Length:211 Identity:89/211 - (42%)
Similarity:131/211 - (62%) Gaps:15/211 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |..|||.::|||:||||:|:|.:|:|..|......|||::|..:.|.:.||:||||||||||||.
 Worm     6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            |.:||.||||||.|.:||||||..::|:::..||.:..:|::.::|.|::|||.|:..||.|.:|
 Worm    71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRE 135

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197
            .||..|::||:.|.||||:...:|:.||.:.|:.|..|:.:...:           |.....||.
 Worm   136 RGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDE-----------QSRDTVNPV 189

  Fly   198 LPGAGGAAGAANSGCC 213
            .|....::|    |||
 Worm   190 QPQRQSSSG----GCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 87/209 (42%)
rab-10NP_491857.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 79/165 (48%)

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