DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and RAB12

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001020471.3 Gene:RAB12 / 201475 HGNCID:31332 Length:340 Species:Homo sapiens


Alignment Length:198 Identity:81/198 - (40%)
Similarity:124/198 - (62%) Gaps:6/198 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFR 69
            :..:.||||..||||:.|:.:|||..|......|:||:|..:.:.:.||:|:||||||||||.|.
Human   137 FKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFN 201

  Fly    70 SITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKEEG 134
            |||.:|||.|.|.:||||||::|||:.|..|::...::::.:..::|:|||.|.::.||:.:::|
Human   202 SITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQG 266

  Fly   135 EAFARE-HGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDI--NNEANGIKIGQQHSPTNP 196
            |.||:: .|:.|.|.||:...||:|.|:....:|.:|:.   .||  |..:|.|...|......|
Human   267 EKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMP---LDILRNELSNSILSLQPEPEIPP 328

  Fly   197 SLP 199
            .||
Human   329 ELP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 81/198 (41%)
RAB12NP_001020471.3 Rab12 139..340 CDD:206699 81/196 (41%)

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