DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab-37

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001041294.1 Gene:rab-37 / 180696 WormBaseID:WBGene00004285 Length:223 Species:Caenorhabditis elegans


Alignment Length:188 Identity:74/188 - (39%)
Similarity:115/188 - (61%) Gaps:4/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL-TIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
            ||.:::||:..||:|||:::.|..|...:.: |:|:::..::||:..|::|||||||||||.|||
 Worm    30 FKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRS 94

  Fly    71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKEEGE 135
            :|.||||.|...||||||..|.:|.:...||...:::....:.:.|:|||.||.  |.|..:||:
 Worm    95 VTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGK 157

  Fly   136 AFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSP 193
            ..|..:.:.||||||:|..||:.||:..|:.:. |::.|.......|:.|.:.....|
 Worm   158 RLAEAYQIPFMETSAKTGFNVDRAFLGLAERML-KLKYGFVPGGEMADTISVADTKKP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 74/188 (39%)
rab-37NP_001041294.1 RAB 30..192 CDD:197555 69/164 (42%)

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