DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab-19

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001370091.1 Gene:rab-19 / 178301 WormBaseID:WBGene00004278 Length:210 Species:Caenorhabditis elegans


Alignment Length:214 Identity:85/214 - (39%)
Similarity:128/214 - (59%) Gaps:16/214 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            :.||||.:::||.||||:|::.:|.:..|......||||:|..:.:.:|||::|||||||.|||.
 Worm     7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQER 71

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ||:||:||||.|.|.:|.||||.:::|..|..|::|..:.:..|:|.:|||.|.||:.:|.::.|
 Worm    72 FRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEAE 136

  Fly   133 EGEAFAREHGL-VFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNP 196
            |.|...|.:|: ..:||||:...||:.||:..|..:..:..:||.            :|.|....
 Worm   137 EAEMLQRANGMFAMLETSAKGNVNVDNAFLELATILKRQYDQGVV------------EQGSSGTF 189

  Fly   197 SLPGAGG--AAGAANSGCC 213
            .| |:||  |.|:....||
 Worm   190 QL-GSGGTTALGSPWQRCC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 83/212 (39%)
rab-19NP_001370091.1 Rab19 8..172 CDD:133267 73/163 (45%)

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