DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and Rab11

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_001238827.3 Gene:Rab11 / 1274700 VectorBaseID:AGAMI1_005458 Length:215 Species:Anopheles gambiae


Alignment Length:214 Identity:101/214 - (47%)
Similarity:131/214 - (61%) Gaps:10/214 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.||||.::|||:|||||.||.:||...|......||||||..|.|.:|||.||.|||||||||.
Mosquito     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 72

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            :|:||.:|||||.||||||||.:..|:.::..||.:.|.|::.|:||||:||||||...|.|..:
Mosquito    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPTD 137

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQH---SPT 194
            |.:.||..:||.|:||||..:.|||.||.|...|||..:.:.......|.:.|:...::   .||
Mosquito   138 EAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGSVIRPNLENIDVKPT 202

  Fly   195 NPSLPGAGGAAGAANSGCC 213
            ||:       ..:....||
Mosquito   203 NPT-------TDSVRKQCC 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 99/212 (47%)
Rab11XP_001238827.3 Rab11_like 9..173 CDD:206660 90/163 (55%)

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