DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and Rab4

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_313105.2 Gene:Rab4 / 1274041 VectorBaseID:AGAMI1_000885 Length:224 Species:Anopheles gambiae


Alignment Length:218 Identity:112/218 - (51%)
Similarity:141/218 - (64%) Gaps:15/218 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
            ||.||||::|||..|.||||||..|.:.:|:.....|||||||:|::.:.||.||||||||||||
Mosquito     4 SYDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWDTAGQE 68

  Fly    67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKK 131
            .|||:||||||||||||||||.|.|::||.|..||.|||..::.|:.|:|:|||.||:..|||..
Mosquito    69 RFRSVTRSYYRGAAGALLVYDTTSRDSFNVLWNWLNDARTLASQNICILLVGNKKDLEEDREVTF 133

  Fly   132 EEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG-------- 188
            .|...||:|:.|:|:||||:|..||||||:..:|.|..||:.|..|.....:||:.|        
Mosquito   134 LEASNFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGDTSARNAA 198

  Fly   189 -------QQHSPTNPSLPGAGGA 204
                   |..|...|...|.||:
Mosquito   199 GTLASGQQPRSRLRPDCSGGGGS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 112/218 (51%)
Rab4XP_313105.2 Rab4 9..169 CDD:206696 94/159 (59%)

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