DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and Rab1

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_061497112.1 Gene:Rab1 / 1273973 VectorBaseID:AGAMI1_003967 Length:201 Species:Anopheles gambiae


Alignment Length:215 Identity:95/215 - (44%)
Similarity:129/215 - (60%) Gaps:22/215 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.||||.::|||:|||||||||:|.|..:...:..||||:|..|.|.:|||.||||||||||||.
Mosquito     5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQER 69

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ||:||.||||||.|.::|||.|..::|.::..|||:..:::..|:..:|:|||.||.:::.|...
Mosquito    70 FRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYACDNVNKLLVGNKCDLQTKKRVDTT 134

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197
            .....|.:.|:.|:||||:.|.|||:||:..|.||..                ::|...|..:| 
Mosquito   135 TAMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKN----------------RVGPPSSAADP- 182

  Fly   198 LPGA----GGAAGAANSGCC 213
             |.|    .|....|.||||
Mosquito   183 -PSAVKIDKGRNVEAKSGCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 93/213 (44%)
Rab1XP_061497112.1 None

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