DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and IFT27

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001171172.1 Gene:IFT27 / 11020 HGNCID:18626 Length:186 Species:Homo sapiens


Alignment Length:173 Identity:59/173 - (34%)
Similarity:91/173 - (52%) Gaps:5/173 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KYIIIGDTGVGKSCL--LLQFTDKRFQPVHDLTIGVEFGARMITI--DGKQIKLQIWDTAGQEAF 68
            |.|:.||..|||:.|  :.:.....||..:.||.|::...:.:.:  .|..::|.|:|:||:|.|
Human     7 KCILAGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELF 71

  Fly    69 RSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDAR-QHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ..:....:.......||||:|..|:||:.:.|||.|| |....::..:|:|||:||..||.|...
Human    72 SEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGISLPGVLVGNKTDLAGRRAVDSA 136

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGV 175
            |..|:|...||...|||.:...|.|..|...||:.::..:|.|
Human   137 EARAWALGQGLECFETSVKEMENFEAPFHCLAKQFHQLYREKV 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 59/173 (34%)
IFT27NP_001171172.1 RabL4 6..172 CDD:206688 57/164 (35%)

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