DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and rab3b

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001093746.1 Gene:rab3b / 100101786 XenbaseID:XB-GENE-483427 Length:217 Species:Xenopus tropicalis


Alignment Length:174 Identity:64/174 - (36%)
Similarity:106/174 - (60%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
            ::.|:||.:|||::.|||:..|.::.|..|......|:|::|..:.:..:.|::|||||||||||
 Frog    18 NFDYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYRNDKRVKLQIWDTAGQE 82

  Fly    67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKK 131
            .:|:||.:|||||.|.:|:||||...::|.:..|....:.:|..|..::|:|||.|::..|.:..
 Frog    83 RYRTITTAYYRGAMGFILMYDITSESSYNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIAP 147

  Fly   132 EEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGV 175
            |:|:..|.:.|..|.|.||:....|::.|......|.:|:.|.:
 Frog   148 EKGKHLADQLGFEFFEASAKENIQVKQVFERLVDIICDKMSESL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 64/174 (37%)
rab3bNP_001093746.1 Rab3 22..186 CDD:206657 61/163 (37%)

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