DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab2 and si:dkey-16l2.16

DIOPT Version :10

Sequence 1:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster
Sequence 2:XP_021327130.1 Gene:si:dkey-16l2.16 / 100003902 ZFINID:ZDB-GENE-141219-36 Length:209 Species:Danio rerio


Alignment Length:159 Identity:74/159 - (46%)
Similarity:106/159 - (66%) Gaps:1/159 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
            |.:|||.:||||:.||||.|||:|.|..|...:..||||:|..|.:.|||:::|||||||||||.
Zfish     6 YHHLFKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVEIDGERVKLQIWDTAGQER 70

  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132
            ||:||.:|||...|.::|||:|..|:|.::..||.:..|:.: |:..:|:|||:|..|::.|..:
Zfish    71 FRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEISQNCD-NVCKILVGNKNDDPSKKLVDTQ 134

  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFI 161
            :...|....|:...||||:...||||.|:
Zfish   135 DAMRFGESVGVRLFETSAKENINVEEMFM 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 74/159 (47%)
si:dkey-16l2.16XP_021327130.1 P-loop containing Nucleoside Triphosphate Hydrolases 4..209 CDD:476819 74/159 (47%)

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