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Protein Alignment Rpp25 and rpp25
DIOPT Version :9
Sequence 1: | NP_001246150.1 |
Gene: | Rpp25 / 35574 |
FlyBaseID: | FBgn0033092 |
Length: | 206 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017947889.2 |
Gene: | rpp25 / 100496900 |
XenbaseID: | XB-GENE-990186 |
Length: | 173 |
Species: | Xenopus tropicalis |
Alignment Length: | 147 |
Identity: | 45/147 - (30%) |
Similarity: | 84/147 - (57%) |
Gaps: | 10/147 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MMHYRKAENVEKELSKSDLPFEDCMPKSQKDFLWMHVKGGTKVSNVIEFAQEALNKGEHRCVVWS 65
|.::|:.:.|::: ....|||::..| |.:.|.||.|:|:.|::.:|...:...|:..:|:|
Frog 1 MENFRRVQVVDED-DGQPLPFKNLHP----DVVKMRVKEGSKIRNLVGYAVTHMLSEENGQIVFS 60
Fly 66 GSGGGVVKTISCAEVLKRS-HPLYQVTRMAYTSVEEHWK---PQME-GLEEIIVTRQIPTLHILM 125
..|.||.|.::|.|:|||. ..|:|||::.|..|:|.|: |::: ....:.|.:..|:::||:
Frog 61 AYGRGVTKAVTCVEILKRKIGGLHQVTKVQYKIVQEVWEQKGPKVQHPAPRLNVQKNYPSINILL 125
Fly 126 SLDELPDTIDGLQKPNT 142
|.:.|....:|.|.|.:
Frog 126 SKEPLDPQEEGYQPPQS 142
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rpp25 | NP_001246150.1 |
Alba |
34..97 |
CDD:280153 |
24/63 (38%) |
rpp25 | XP_017947889.2 |
Alba |
30..93 |
CDD:396481 |
24/62 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
49 |
1.000 |
Domainoid score |
I11629 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
87 |
1.000 |
Inparanoid score |
I4989 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1075123at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002040 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48075 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13516 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1508 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 8.070 |
|
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