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Protein Alignment Rpp25 and rpp25l
DIOPT Version :9
Sequence 1: | NP_001246150.1 |
Gene: | Rpp25 / 35574 |
FlyBaseID: | FBgn0033092 |
Length: | 206 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001107352.1 |
Gene: | rpp25l / 100135176 |
XenbaseID: | XB-GENE-5793607 |
Length: | 183 |
Species: | Xenopus tropicalis |
Alignment Length: | 185 |
Identity: | 61/185 - (32%) |
Similarity: | 97/185 - (52%) |
Gaps: | 19/185 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 KELSKSDLPFEDCMPKSQKDFLWMHVKGGTKVSNVIEFAQEALNKGEHRCVVWSGSGGGVVKTIS 76
|::..:::|....:|....|.:.|.|:.|:|:.|::.||...:.:...|.:|:||||..:.||||
Frog 5 KKVGVAEVPMAVPIPGLPPDTIEMKVRDGSKMRNLLGFAIGQMERQATRQIVFSGSGKALGKTIS 69
Fly 77 CAEVLKRS-HPLYQVTRMAYTSVEEHWKPQME--GLEEIIVTRQIPTLHILMSLDELPDTIDGLQ 138
|||::||. ..|:|:||:.:...:|.|:|.:. ||:.:.|.|..|::.||:|.|.|.....|.|
Frog 70 CAEIMKRRLGGLHQLTRVCFRQTQETWEPIVPDVGLDPLTVRRNCPSVCILLSKDPLDPAEPGYQ 134
Fly 139 KPNTSTDFWDGGGAQQ--QPHPRSQPR--------HQQQPHKPGAGRGGRPNKRT 183
.|.:....| .|| :..||.:.| ..:||..||...|| :|||
Frog 135 APGSYDTHW----VQQLREETPRQKRRGTGRAGGDGTKQPRGPGGPGGG--HKRT 183
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rpp25 | NP_001246150.1 |
Alba |
34..97 |
CDD:280153 |
26/63 (41%) |
rpp25l | NP_001107352.1 |
Alba |
27..89 |
CDD:376663 |
26/61 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
49 |
1.000 |
Domainoid score |
I11629 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
87 |
1.000 |
Inparanoid score |
I4989 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002040 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48075 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1508 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 5.050 |
|
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