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Protein Alignment Rpp25 and rpp25a
DIOPT Version :9
Sequence 1: | NP_001246150.1 |
Gene: | Rpp25 / 35574 |
FlyBaseID: | FBgn0033092 |
Length: | 206 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001338627.1 |
Gene: | rpp25a / 100000532 |
ZFINID: | ZDB-GENE-061215-1 |
Length: | 204 |
Species: | Danio rerio |
Alignment Length: | 173 |
Identity: | 54/173 - (31%) |
Similarity: | 88/173 - (50%) |
Gaps: | 18/173 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 KELSKSDLPFEDCMPKSQKDFLWMHVKGGTKVSNVIEFAQEALNKGEHRCVVWSGSGGGVVKTIS 76
:::..:..|..:.:|....|.|.|.||.|:|:.|::.||...:.......|::||:|..|.|||:
Zfish 35 RKIRSTGEPIPNPIPGLASDVLEMRVKEGSKIRNLLGFAMSRIEGDGQTQVLFSGTGRAVTKTIT 99
Fly 77 CAEVLKRS-HPLYQVTRMAYTSVEEHWKPQMEGLEEIIVTRQIPTLHILMSLDELPDTIDGLQKP 140
|||::||. ..|:||:::.|.:|.|.|:.|. .::.|.|.:|::.||:|.:.|.....|.|.|
Zfish 100 CAEIMKRKVAGLHQVSKLQYRTVTEVWESQE---SQMTVHRTLPSICILLSKEPLDPHEPGYQPP 161
Fly 141 ---NTSTDFW---DG--GGAQQQPHPRSQPRHQQQPHKPGAGR 175
||.::.. || |..:.:..|.|...| ||..|
Zfish 162 VETNTLSEEHRQVDGVQGSGKTEKRPLSPCDH------PGLKR 198
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rpp25 | NP_001246150.1 |
Alba |
34..97 |
CDD:280153 |
25/63 (40%) |
rpp25a | NP_001338627.1 |
Alba |
57..121 |
CDD:307849 |
25/63 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170579956 |
Domainoid |
1 |
1.000 |
54 |
1.000 |
Domainoid score |
I11219 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
91 |
1.000 |
Inparanoid score |
I5091 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1075123at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002040 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm24520 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101937 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13516 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1508 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
10 | 9.900 |
|
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