DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and TYRDC

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001329473.1 Gene:TYRDC / 828986 AraportID:AT4G28680 Length:566 Species:Arabidopsis thaliana


Alignment Length:525 Identity:206/525 - (39%)
Similarity:290/525 - (55%) Gaps:59/525 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVEEFRKYGKEVIDYICQYGTNIEER----DVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFE 61
            ||.|..|:.|..::|:|..|..|:::.    .|...:.||||:.:||..||:.||..|::|:|..
plant    51 MDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVS 115

  Fly    62 QKIMPGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKAL 126
            :|||||:.||..|.:|||:.|..|....||:||::.:..:||:|.:.|||.|||.||::|.||.|
plant   116 KKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLL 180

  Fly   127 GLPKAFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQTSVHDSVFLPSLIAYASREA 191
            .||..|:|...|: |||.:||:..|.|||.::.||.|.:.:: |:|      .||.|:.|.|.:.
plant   181 QLPDHFLSTGKGN-GGGVIQGTGCEAVLVVVLAARDRILKKV-GKT------LLPQLVVYGSDQT 237

  Fly   192 HSSVEKATKMALV---KLRIIDAD---EHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCA 250
            |||..||..:..:   .:|::..|   .:| |..:.|.:||.:|:..|..|||:.||||||...|
plant   238 HSSFRKACLIGGIHEENIRLLKTDSSTNYG-MPPESLEEAISHDLAKGFIPFFICATVGTTSSAA 301

  Fly   251 FDDITEIGKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASAL 315
            .|.:..:|.:.::. .||||||.|||||:.|.||.|.|..|:|.|||||.|.:|.|..|...|.|
plant   302 VDPLVPLGNIAKKY-GIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPL 365

  Fly   316 WVRDVMNLKSALNVNPLYLR---HEHLTGVDYRHYGIPLSRRF---------------------- 355
            ||:|..:|..||..||.||.   .:..|.|:|:.:.|.|||||                      
plant   366 WVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRFFISPFDVVFAGPISLTNLYV 430

  Fly   356 ------RALKLWFVFRTYGIRGLQEYIRNHMALAKKFEMLVRKDERFEVRNDVHLGLVCFRMR-- 412
                  |:||||.|.|.||...|:.:||:|:.|||.||..|.:|..|||....:..|||||:.  
plant   431 HAFDLYRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPV 495

  Fly   413 TGDEP-----NHMLLAQINHSGKMHMTPAKFNGRYVIRFCVTYEHATEKDILEAWTQIKCFAEEI 472
            .|||.     |..|||.:|.:||:.::....:|::|:||.|......||.:.|||..|:..|.:.
plant   496 DGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 560

  Fly   473 LR-DH 476
            .| ||
plant   561 TRNDH 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 171/413 (41%)
TYRDCNP_001329473.1 PLN02590 2..566 CDD:178200 206/525 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 368 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 417 1.000 Inparanoid score I444
OMA 1 1.010 - - QHG57772
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - mtm1068
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - O PTHR11999
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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