DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and hdc

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_005169965.1 Gene:hdc / 793609 ZFINID:ZDB-GENE-080102-5 Length:608 Species:Danio rerio


Alignment Length:532 Identity:237/532 - (44%)
Similarity:340/532 - (63%) Gaps:10/532 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVEEFRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM 65
            |..:|:...|||:::||.||.|.|.||.|.|.:.||:::.|||:.||..||.:..:::|.|..||
Zfish     1 MQPQEYMLRGKEMVEYIHQYLTGIRERRVVPDVQPGFMRPLLPSSAPYEPEDWSTIMQDVENIIM 65

  Fly    66 PGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPK 130
            ||||||..|...||||:.||:||:|||||:.||..:||:|||.||..|||..|::|..||||||.
Zfish    66 PGVVHWQSPHMHAYFPALNSWPSLLGDMLADAINCLGFTWASSPACTELEMCVLDWLCKALGLPD 130

  Fly   131 AFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQ---TSVHDSVFLPSLIAYASREAH 192
            .::...|.|||||.||.:.|||.||:|:.||...|.::|.:   |...:||....|:||||.:||
Zfish   131 HYLHHHPQSTGGGILQSTVSECTLVALLAARKDRILQMKSEATHTDTDESVLNSRLVAYASDQAH 195

  Fly   193 SSVEKATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEI 257
            ||||||..::|||:|.:..|....:|.:.|::|::.|..:||.|..|.||:|:||.|:||.:.|:
Zfish   196 SSVEKAGLISLVKIRFLQTDAVFSLRGETLQRAVEEDRRSGLIPVMVCATLGSTGVCSFDRLDEL 260

  Fly   258 GKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMN 322
            |.||.: ..:|||||.||||::.:.||:|.|..|:::||||..||:|.:|.:||.:|.||::.|.
Zfish   261 GPVCVR-EGLWLHVDAAYAGSALLCPELRYFLDGIQFADSFVFNPSKWMLVHFDCTAFWVKNKMK 324

  Fly   323 LKSALNVNPLYLRHEHLTGVDYRHYGIPLSRRFRALKLWFVFRTYGIRGLQEYIRNHMALAKKFE 387
            |:....|:||||||::....|:.|:.||||||||:||||||.|::|::.|||:||:.:.:||.||
Zfish   325 LQQTFTVDPLYLRHDNSNATDFMHWQIPLSRRFRSLKLWFVIRSFGLKKLQEHIRHGVEMAKLFE 389

  Fly   388 MLVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQINHSGKMHMTPAKFNGRYVIRFCVTYEH 452
            .|||.|..|::....|||||.|.:|.|:.....||.::..||:|.:.||....:.::||.||.:.
Zfish   390 SLVRNDTHFQIPAQRHLGLVVFCLRAGNAATQELLRKLTRSGRMFLIPAAVGNQLILRFSVTSQL 454

  Fly   453 ATEKDILEAWTQIKCFAEEILRDHQLESSSVPTTPEGSERTSSEPLA-PVAGKPPIKKRLTRTKS 516
            .||:||...|:.|:..|.|:     |:|..|...|..:....|||.: .:..:|.:.:||.|...
Zfish   455 TTEQDIRRDWSLIQQAAREV-----LQSGVVTRQPSVTSDPESEPESLTIHTEPMLDQRLVRQGQ 514

  Fly   517 LRFSFTRSISRE 528
            .|...:.|.|.|
Zfish   515 RRAVRSYSCSAE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 186/379 (49%)
hdcXP_005169965.1 Pyridoxal_deC 35..414 CDD:278699 186/379 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11538
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100572
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.730

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