DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and Csad

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_068518.1 Gene:Csad / 60356 RGDID:621030 Length:493 Species:Rattus norvegicus


Alignment Length:420 Identity:119/420 - (28%)
Similarity:184/420 - (43%) Gaps:56/420 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIMPGVVHWN----H 73
            |:|...:.|||..|: |....:|..||:||..:.....|..:.:||...     .|:|::    |
  Rat    28 VVDEAIRKGTNASEK-VCEWKEPEELKQLLDLELQSQGESRERILERCR-----AVIHYSVKTGH 86

  Fly    74 PKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPKAFVSDAPG 138
            |:||....||....::.|.:::.::.:..:::...|....:|..|:......:|          .
  Rat    87 PRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLKKLRALVG----------W 141

  Fly   139 STGGGAL--QGSASECVLVSLITARARAISELKGQTSVHDSVFLPSLIAYASREAHSSVEKATK- 200
            :||.|..  .||.|....::|  ||.:...:.| |..:.   .||.|..:.|:|.|.|:.|... 
  Rat   142 NTGDGVFCPGGSISNMYAINL--ARFQRYPDCK-QRGLR---ALPPLALFTSKECHYSITKGAAF 200

  Fly   201 --MALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEIGKVCRQ 263
              :....:|::.|||.|:|..:.|.:.|......|..||.|.||.|||...|||.:..|..|| |
  Rat   201 LGLGTDSVRVVKADERGKMIPEDLERQISLAEAEGSVPFLVSATSGTTVLGAFDPLDAIADVC-Q 264

  Fly   264 VSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMNLKSALN 328
            ...:|||||.|:.|:..:....|....|::.|||...||:|||......|||.:||..||     
  Rat   265 RHGLWLHVDAAWGGSVLLSRTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLRDTSNL----- 324

  Fly   329 VNPLYLRHEHLTGVDY-----RHYGIPL---------SRRFRALKLWFVFRTYGIRGLQEYIRNH 379
                 |:..|.:...|     :.|.:.|         .||...||||.:::..|.:||:..|...
  Rat   325 -----LKRCHGSQASYLFQQDKFYNVALDTGDKVVQCGRRVDCLKLWLMWKAQGGQGLEWRIDQA 384

  Fly   380 MALAKKFEMLVRKDERFEVRNDVHLGLVCF 409
            .||.:.....::|.|.||:..:.....|||
  Rat   385 FALTRYLVEEIKKREGFELVMEPEFVNVCF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 112/398 (28%)
CsadNP_068518.1 DOPA_deC_like 89..489 CDD:99743 100/353 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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