DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and gad2

DIOPT Version :10

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001017708.2 Gene:gad2 / 550403 ZFINID:ZDB-GENE-030909-9 Length:583 Species:Danio rerio


Alignment Length:429 Identity:111/429 - (25%)
Similarity:185/429 - (43%) Gaps:64/429 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPA---DAPQSPEPFKDVLEDFEQKIMPGVVHWN 72
            :||:|.:..|.....:|. ...:|..|..:||..   :....||...|:|... :..:...:...
Zfish   110 QEVVDILLAYIVESFDRS-TKVIDFHYPNELLQRNNWELSDEPETLDDILISC-RATLKYAIKTA 172

  Fly    73 HPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPKAFVSDAP 137
            ||::|....:|.....:..|.|:|...:..|::...|....||.:.:....:.:|.     .|..
Zfish   173 HPRYFNQLSTGLDMVGLAADWLTSTANTNMFTYEVAPVFVLLEYVTLKKMREIIGW-----QDGH 232

  Fly   138 GS---TGGGALQGSASECVLVSLITARARAISEL--KGQTSVHDSVFLPSLIAYASREAHSSVEK 197
            |.   :.|||:..      :.:::.||.:...|:  ||.:||      |.|:|:.|..:|.|::|
Zfish   233 GDGIFSPGGAISN------MYAMLLARYKMFPEVKEKGMSSV------PRLVAFTSEHSHFSIKK 285

  Fly   198 ---ATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEIGK 259
               |..:....:..|.|||.|:|....|.:.|......|..||||.||.|||...|||.:..|..
Zfish   286 GAAALGIGTESVICIKADERGKMIPSDLERRIIEAKQKGYVPFFVSATAGTTVYGAFDPLIAIAD 350

  Fly   260 VCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMNLK 324
            :|:: ..:|:|||||:.|:..:..:.|....|:|.|:|...||:|::......|||.||:...::
Zfish   351 ICKK-HDVWMHVDGAWGGSLLMSRKHRWKLNGVERANSMTWNPHKMMAVPLQCSALLVREEGLMQ 414

  Fly   325 SALNVNPLYLRHEHLTGVDYRHYGIPLSRRFRAL---------KLWFVFRTYGIRG--------- 371
            |...:...||..:.      :||.:......:||         |||.::|..|..|         
Zfish   415 SCNQMQACYLFQQD------KHYDLQYDTGDKALQCGRHVDIFKLWLMWRAKGTIGFEAQIDKCL 473

  Fly   372 -LQEYIRNHMALAKKFEMLVRKDERFEVRNDVHLGLVCF 409
             |.||:.|.:...:.::|:.  |.:.:..|      |||
Zfish   474 ELSEYLYNKIKDREGYQMVF--DGKPQHTN------VCF 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:395219 105/405 (26%)
gad2NP_001017708.2 PHA00540 102..>156 CDD:133910 11/46 (24%)
Pyridoxal_deC 136..506 CDD:395219 104/402 (26%)
TIM-like beta/alpha barrel domains 511..>561 CDD:473867
Blue background indicates that the domain is not in the aligned region.

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