DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and ddc

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_998507.1 Gene:ddc / 406651 ZFINID:ZDB-GENE-040426-2656 Length:480 Species:Danio rerio


Alignment Length:484 Identity:223/484 - (46%)
Similarity:325/484 - (67%) Gaps:16/484 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVEEFRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM 65
            ||..|||:.|:|::||:..|..|||:|.|.|.::||||:.|:|.:||:.||.::||::|.|:.||
Zfish     1 MDAAEFRRRGREMVDYVADYIENIEKRQVYPDVEPGYLRSLIPEEAPEEPESYEDVVKDIERVIM 65

  Fly    66 PGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPK 130
            |||.||:.|.|:||||:.:|:|::|.|:|..|||.||||||:.||..||||::::|..|.|.||:
Zfish    66 PGVTHWHSPYFYAYFPTAHSYPAMLADILCGAIGCIGFSWAASPACTELETVMLDWLGKMLKLPE 130

  Fly   131 AFVSDAPGSTGGGALQGSASECVLVSLITARARAISEL------KGQTSVHDSVFLPSLIAYASR 189
            .|::...|. |||.:|.:|||..|::|:.||::.:..:      :.:|.:     :..|:||:|.
Zfish   131 DFLAGTKGK-GGGVIQSTASEATLITLLAARSKIVRLIQADHPDRSETDI-----ISKLVAYSSD 189

  Fly   190 EAHSSVEKATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDI 254
            :||||||:|..:..|:::.|..|....:|.|.|.:.::.|..|||.|||..||:|||..||||.|
Zfish   190 QAHSSVERAGLIGGVRMKKIPTDSKFSVRGDALERILKEDKAAGLIPFFFCATLGTTASCAFDCI 254

  Fly   255 TEIGKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRD 319
            ||:|.:| ....:|:|:|.||||::||.||.|....|:|:|||||.||:|.||.|||.||:||:.
Zfish   255 TELGPIC-NAEKMWMHIDAAYAGSAFICPEFRPLLNGIEFADSFNFNPHKWLLINFDCSAMWVKK 318

  Fly   320 VMNLKSALNVNPLYLRHEHLTG---VDYRHYGIPLSRRFRALKLWFVFRTYGIRGLQEYIRNHMA 381
            ..::..|..:.||||:|:|...   .||||:.|||.||||:||:|||||.||::.||.|||.|:.
Zfish   319 RADIIGAFKMEPLYLKHDHQESGLVTDYRHWQIPLGRRFRSLKMWFVFRMYGLKALQAYIRKHVG 383

  Fly   382 LAKKFEMLVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQINHSGKMHMTPAKFNGRYVIRF 446
            |||:||..||.|:|||:..||.:||||||::..:|.:..||.:||.:.|:|:.|....|.:|:||
Zfish   384 LAKEFEAFVRADQRFEISADVVMGLVCFRLKGPNELSENLLKRINSARKIHLVPCHLAGLFVLRF 448

  Fly   447 CVTYEHATEKDILEAWTQIKCFAEEILRD 475
            .|.......:.:.|||..|:..|.|:|::
Zfish   449 AVCARATESRHVQEAWCHIRQLASELLQE 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 187/385 (49%)
ddcNP_998507.1 AAT_I 1..478 CDD:302748 223/484 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100572
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.730

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