DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc1 and CG5618

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_649211.1 Gene:CG5618 / 40241 FlyBaseID:FBgn0036975 Length:510 Species:Drosophila melanogaster


Alignment Length:508 Identity:129/508 - (25%)
Similarity:211/508 - (41%) Gaps:67/508 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIMPGVVH 70
            |....||  |..|......:::.:.|.|.|..||:|:.....::.......:|:..|:::...|.
  Fly    29 FHLLRKE--DTFCVDPQKWDKQKIVPFLQPDKLKELINLKVRETENCSLAEIEELCQQVIHYSVK 91

  Fly    71 WNHPKFF-AYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPKAFVS 134
            .:|.:|. ..|...:.| .:.|.:::.|:....:::...|..:.:||.|:....|..|..:....
  Fly    92 TSHGRFHNQLFGQLDPF-GLAGALVTEAMNGSTYTYEVAPVFSLIETEVIATICKLAGYKEGDGI 155

  Fly   135 DAPGSTGGGALQGSASECVLVSLITARARAISELKGQTSVHDSVF-LPSLIAYASREAHSSVEKA 198
            .|||        ||.|.  :..::.||.:...|:|  ||   .:| :..|:.:.|.|:|.|..||
  Fly   156 FAPG--------GSTSN--MYGMVLARYKIAPEVK--TS---GMFGMRPLVLFTSDESHYSFVKA 205

  Fly   199 TKMA------LVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEI 257
            ....      .|.:|   .:|.|:|.:|.|...|......|..||||..|.|||...|||||...
  Fly   206 ANWLGLGSYNCVSVR---TNERGQMLLDDLEAKIAEAKARGGEPFFVNCTAGTTVLGAFDDINGA 267

  Fly   258 GKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMN 322
            ..|..: ..:|||||....|.:.:..:.|...||||.|:||:.||:|.:......|....|:...
  Fly   268 ADVTER-HGLWLHVDACLGGAALLSAKNRSLIAGLERANSFSWNPHKTIGAPLQCSLFLTRESGR 331

  Fly   323 LKSALNVNPLY--LRHEHLTGVDY--RHYGIPLSRRFRALKLWFVF--RTYGIRGLQEYIRNHMA 381
            |....|....:  .:.:....|.|  .:..:...|:..|.|.|.:.  |.||..||.  :.:.:.
  Fly   332 LLERCNSTEAHYLFQQDKFYDVSYDTGNKSVQCGRKIDAFKFWLMLKARGYGKYGLM--VDHAIH 394

  Fly   382 LAKKFE-MLVRKDERFEVRNDVH-LGLVCF-----RMRTGDEPN------------HMLLAQINH 427
            :|:..| .|.::.:||.:....| ...|||     .||...|..            ..:..|:.|
  Fly   395 IARLLEGKLRQRGDRFRLVIPEHEYSNVCFWFIPKAMRVSSEEETPEWWSRLYTVAPKIKEQMAH 459

  Fly   428 SGKMHM--TP--AKFNGRY--VIRFCVTYEHATEKD-ILEAWTQIKCFAEEIL 473
            ||.:.:  :|  ||..|.:  ::..|.....:.|.| ||:   :|:...|:|:
  Fly   460 SGTLMIGYSPLKAKNLGNFFRMVFTCFPILKSKELDFILD---EIERLGEKIV 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 103/397 (26%)
CG5618NP_649211.1 AAT_I 97..504 CDD:302748 112/431 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.