DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and Sgpl1

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_008771093.2 Gene:Sgpl1 / 286896 RGDID:628599 Length:648 Species:Rattus norvegicus


Alignment Length:484 Identity:100/484 - (20%)
Similarity:171/484 - (35%) Gaps:131/484 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM------PGVVHWNHPKFFAYFPSGNSFPSVLG 91
            ||..|: |.|||....:.|..:.:.|.....:.      .|.|:...||              |.
  Rat   188 LDKDYV-KTLPAQGLSTAEVLERLKEYSSMDVFWQEGKASGAVYSGEPK--------------LT 237

  Fly    92 DMLSSAIGSIGFSWAS------CPAAAELETIVMNWYAKALGLPKAFVSDAPGSTGGGALQGSAS 150
            ::|..|.|.  |:|::      .|...:||       |:.:.:..:..:..|.|.  |.:....:
  Rat   238 ELLVQAYGE--FTWSNPLHPDIFPGLRKLE-------AEIVRMTCSLFNGGPDSC--GCVTSGGT 291

  Fly   151 ECVLVSLITARARAISELKGQTSVHDSVFLPSLIAYASREAHSSVEKATKMALVKLRIIDADEHG 215
            |.:|::....|..|:.  ||       :..|.::|..|  ||::.:||..  ...::|:...:..
  Rat   292 ESILMACKAYRDLALE--KG-------IKTPEIVAPES--AHAAFDKAAH--YFGMKIVRVAQKK 343

  Fly   216 RMRVDL--LRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEIGKVCRQVSSIWLHVDGAYAGN 278
            .|.||:  :::||..:     |...|.:......| ..|.|.|:.|:..:. .|..|||....| 
  Rat   344 NMEVDVRAMKRAISRN-----TAMLVCSAPQFPHG-VIDPIPEVAKLAVKY-KIPFHVDACLGG- 400

  Fly   279 SFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMNLKS--------------ALNV 329
             |::..|......||....|.                 |:.|.::.:              .:..
  Rat   401 -FLIVFMEKAGYPLEKPFDFR-----------------VKGVTSISADTHKYGYAPKGSSVVMYS 447

  Fly   330 NPLYLRHEHLTGVDYRH--YGIPLSRRFR----ALKLWFVFRTYGIRGLQEYIRNHMALAKKFEM 388
            |..|.:::.....|::.  |..|.....|    ....|.....:|..|   |:.....:.|....
  Rat   448 NEKYRKYQFFVDADWQGGIYASPSIAGSRPGGIIAACWAALMHFGENG---YVEATKQIIKTARF 509

  Fly   389 LVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQINHSGKMH----MTPAK-FNGRYV----- 443
            |  |.|...::|...||          :|...::|..::...::    |..|| :|..|:     
  Rat   510 L--KSELENIKNIFILG----------DPQLSVIALGSNDFDIYRLSNMMSAKGWNFNYLQFPRS 562

  Fly   444 IRFCVTYEHATE-------KDILEAWTQI 465
            |.||:|..|..:       |||.|:.|||
  Rat   563 IHFCITLVHTRKRVAIQFLKDIRESVTQI 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 79/410 (19%)
Sgpl1XP_008771093.2 DOPA_deC_like 226..587 CDD:99743 87/439 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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