DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and spl-3

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_500051.2 Gene:spl-3 / 190868 WormBaseID:WBGene00022427 Length:606 Species:Caenorhabditis elegans


Alignment Length:505 Identity:104/505 - (20%)
Similarity:166/505 - (32%) Gaps:159/505 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 GSTGGGALQGSASECVLVSLITARARAISELKGQTSVHDSVFLPSLIAYASREAHSSVEKAT--- 199
            |....|.:.|..:|.::::.:..|.|  |..:|:...  .:..||       .||.:::||.   
 Worm   194 GKDSCGVVAGGGTEALMLACLAYRNR--SRARGEWRA--EIVAPS-------TAHPALDKAAAFF 247

  Fly   200 KMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGT--TGGCAFDDITEIGKVCR 262
            .|.:.::::.:.|:  |..|..:::||      |.....::|:...  ||  ..|.|.::.|:.:
 Worm   248 DMTIKRIQVSETDD--RANVGAMKRAI------GPRTCMIIASAPNHITG--TVDPIEKLAKLAQ 302

  Fly   263 QVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYAD---------------------SFNTNPNKLL 306
            :. .|.||||....|  |:||.|       ||||                     .:...|.:| 
 Worm   303 RY-HIPLHVDCTLGG--FVLPFM-------EYADYSVPAFDFRLPGVTSISADLHRYGQCPGRL- 356

  Fly   307 LTNFDASALWVRDVMNLKSALNVNPLYLRHEHLTGVDYRH--YGIPLSRRFR----ALKLWFVFR 365
                  |.|..|:           |.:|||:..|..::..  |..|.....|    ....|.:..
 Worm   357 ------SVLMYRE-----------PAFLRHQFFTNSEWPGGCYATPTMSGGRDGGAVATAWAMML 404

  Fly   366 TYG----IRGLQEYIRNHMALAKKFEMLVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQIN 426
            ..|    |...|..|.....||.:.:.|    :...:|....|.:|.|   |..|.|...|..:.
 Worm   405 RKGRDGYINAAQRIIEATRQLAYRLQGL----DGVSLRGSADLCVVAF---TTSEVNVYNLVDVM 462

  Fly   427 HSGKMH----MTPAKFNGRYVIRFCVTYEHATEKDILEAWTQIKCFAEEILRDHQLE-------- 479
            .....|    ::||.......:..|                      ||.:.||.||        
 Worm   463 VQKGWHVDPLLSPAAARVPISLSMC----------------------EEGVLDHFLEDLEMAICN 505

  Fly   480 -SSSVPTTPEGSERTSSEPLAPVAGK------------------PPIKKRLTRTKSLRFSFTRSI 525
             .|..|....|:..:..:.|..|..|                  ||.::|..||.|:.   .|.:
 Worm   506 LKSMEPAEKLGTTASFYQMLQKVNDKTLVDELSLIRLAAHYSIPPPAERRSLRTLSVE---GRKL 567

  Fly   526 SREQYQSQSEHLMDGCTPILVVDPKTLQENFQKAADDNDRNNSNGNVKLK 575
            |           |.|.|..:....:.|:..|||..:.......|.|.:.|
 Worm   568 S-----------MLGATGDMGKKLEELRRGFQKEKEAKQEALKNENSEEK 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 66/309 (21%)
spl-3NP_500051.2 DOPA_deC_like 147..502 CDD:99743 80/385 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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