DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc1 and spl-2

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_505372.1 Gene:spl-2 / 181859 WormBaseID:WBGene00006418 Length:542 Species:Caenorhabditis elegans


Alignment Length:574 Identity:113/574 - (19%)
Similarity:198/574 - (34%) Gaps:171/574 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DVEEFRKYGKEVIDYICQYGTNIEERDVAPT-----------LD-PGYLKKLLPADAPQSPEPFK 54
            :|::..:....::|...:|.|.|....|..|           |: |.:|:..: :.|..:.|..|
 Worm    79 EVKDELEKSLRIVDRSTEYFTTIPSHSVGRTEVLRLAAIYDDLEGPAFLEGRV-SGAVFNREDDK 142

  Fly    55 DVLEDFEQKIMPGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVM 119
            |..|.:|:..  |...|.:|.:...||......:.:..|..:                     :|
 Worm   143 DEREMYEEVF--GKFAWTNPLWPKLFPGVRIMEAEVVRMCCN---------------------MM 184

  Fly   120 NWYAKALGLPKAFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQTSVHDSVFLPSLI 184
            |..::..|..         ||||       |..:|::.:..|.|.:.  :|:.  :..:.:||.:
 Worm   185 NGDSETCGTM---------STGG-------SISILLACLAHRNRLLK--RGEK--YTEMIVPSSV 229

  Fly   185 AYASREAHSSVEKATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVN------AGLTPFFVVATV 243
                   |::..||.:...:|:|.|..|. ...:|||::  ::..:|      .|..|.|...||
 Worm   230 -------HAAFFKAAECFRIKVRKIPVDP-VTFKVDLVK--MKAAINKRTCMLVGSAPNFPFGTV 284

  Fly   244 GTTGGCAFDDITEIGKVCRQVSSIWLHVDGAYAGNSFILP-----EMRVFSAGLEYADSFNTNPN 303
                    |||..||::..:. .|.:|||....|  |:||     |:| :...:....|.:.:.:
 Worm   285 --------DDIEAIGQLGLEY-DIPVHVDACLGG--FLLPFLEEDEIR-YDFRVPGVSSISADSH 337

  Fly   304 KLLLTNFDASALWVRDVMNLKSALNVNPLYLRHEHLTGVDYRHYGIPLSRRFRALK-------LW 361
            |..|....:|.:..|           |...|.:::....|::. ||..|......:       .|
 Worm   338 KYGLAPKGSSVVLYR-----------NKELLHNQYFCDADWQG-GIYASATMEGSRAGHNIALCW 390

  Fly   362 FVFRTYGIRGLQEYIRNHMALAKKFEMLVRKDERFEVRN--------------DVHL-------G 405
            .....:...|       :.|.|:|.....||     :||              ||.:       |
 Worm   391 AAMLYHAQEG-------YKANARKIVDTTRK-----IRNGLSNIKGIKLQGPSDVCIVSWTTNDG 443

  Fly   406 LVCFRMRTGDEPNHMLLAQINHSGKMHMTPAKFNGRYVIRFCVTYEHATEKDILEAWTQIKCFAE 470
            :..:|.....:..|..|..:.....:|:             .||..| |...:.||:......|.
 Worm   444 VELYRFHNFMKEKHWQLNGLQFPAGVHI-------------MVTMNH-THPGLAEAFVADCRAAV 494

  Fly   471 EILRDHQLESSSVPTTPEGSERTSSEPLAPVAGKPPIKKRLTRTKSLRFSFTRS 524
            |.::.|:         |..|::||...:..:|...|       .:||...|..|
 Worm   495 EFVKSHK---------PSESDKTSEAAIYGLAQSIP-------DRSLVHEFAHS 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 83/415 (20%)
spl-2NP_505372.1 DOPA_deC_like 130..493 CDD:99743 90/466 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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