DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and hdl-1

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_502265.2 Gene:hdl-1 / 178129 WormBaseID:WBGene00001839 Length:905 Species:Caenorhabditis elegans


Alignment Length:526 Identity:197/526 - (37%)
Similarity:296/526 - (56%) Gaps:24/526 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVEEFRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM 65
            |..::||...|:|:||:.:...:|.....:|.|.|||||.|||..|||..|...|:|||:.:.|:
 Worm   343 MSRDQFRNAAKKVVDYLMKQDESIRAARCSPALKPGYLKALLPPKAPQKAEDIDDILEDYHKLIV 407

  Fly    66 PGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPK 130
            ||:.|.:||.|.:::|:||||..:|.|:|...||..||.|.|.||..|||.::|:|..:.:.|||
 Worm   408 PGLSHSSHPNFHSFYPAGNSFHCLLADLLGGHIGDAGFYWTSNPALTELEVLMMDWLGEMMALPK 472

  Fly   131 AFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQTS-VHDSVFLPSLIAYASREAHSS 194
            .|:.....|.|||.:|.|.:|...:.|:.||...|..:|.:.. :..|..|..|:||.|.:|..|
 Worm   473 EFLLFPEASRGGGCMQRSDTESNFLVLVAARTDMIRRMKQRDKRLRSSDILARLVAYTSSDARRS 537

  Fly   195 V--EKATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEI 257
            :  :.|.::|:||:|::..|::..:|.|.|..||..|:..||.||||.|..||:|.|:||.:.|:
 Worm   538 IKMKMAAEVAMVKMRVLPTDQNFILRGDTLHAAIMADIERGLIPFFVGANFGTSGPCSFDHLHEL 602

  Fly   258 GKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMN 322
            |.|||: ...|||||.||||.:.|.||:|....|:::||||.|.|:||::...|...|||||...
 Worm   603 GPVCRE-HGTWLHVDAAYAGTALICPEIRGLMRGIDWADSFCTTPSKLIIAVCDVCCLWVRDRHK 666

  Fly   323 LKSA-LNVNPLYLRHEHLTGVDYRHYGIPLSRRFRALKLWFVFRTYGIRGLQEYIRNHMALAKKF 386
            |:.| |..:|           |....|:|.|:|..|||:||:.|::|:..||..||.|:.|.:..
 Worm   667 LQHASLENHP-----------DLPFKGLPTSQRVGALKIWFMIRSFGVENLQNQIREHIRLGQVM 720

  Fly   387 EMLVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQINHSGKMHMTPAKFNGRYVIRFCVTYE 451
            ..:::||.||||.|.|.:||:|||.::.|..|..||.:.|.:|.:.:.......::|||.|:...
 Worm   721 TKILQKDLRFEVCNKVVMGLICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSP 785

  Fly   452 HATEKDILEAWTQIKCFAEEILRDHQ-----LESSSVPTTPEGSERTSSEPLAPVAGKPPIKKRL 511
            ..:|:|:..|:..| |...:||:..|     :..:.:.|......:..|.  |.|:.:.|:...|
 Worm   786 KCSEEDLDSAYKLI-CNEYDILKPFQYRIEVMNQAELETFIRDPAKIHSS--AEVSRRFPVVNPL 847

  Fly   512 TRTKSL 517
            ...:||
 Worm   848 EPCRSL 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 161/380 (42%)
hdl-1NP_502265.2 Pyridoxal_deC 377..746 CDD:278699 161/380 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11999
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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