DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and tdc-1

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_495743.1 Gene:tdc-1 / 174327 WormBaseID:WBGene00006562 Length:705 Species:Caenorhabditis elegans


Alignment Length:546 Identity:279/546 - (51%)
Similarity:368/546 - (67%) Gaps:17/546 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVEEFRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM 65
            |..:|||:||||.:|||..|..||::|.|.|.::|||||.|:|::||.:||.|:.|:||||:.||
 Worm    77 MTRDEFRQYGKETVDYIVDYLENIQKRRVVPAIEPGYLKDLIPSEAPNTPESFESVMEDFEKLIM 141

  Fly    66 PGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPK 130
            ||:.||.||:|.||||:||||||::.||||.|||.:|||||:|||..|||.|:::|:.|.:|||.
 Worm   142 PGITHWQHPRFHAYFPAGNSFPSIIADMLSDAIGCVGFSWAACPAMTELELIMLDWFGKMIGLPA 206

  Fly   131 AFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQ-TSVHDSVFLPSLIAYASREAHSS 194
            .|:.......|||.:|.|||||..|:|:.||...:.||:.: ..|.:.:.|..||||.|:|||||
 Worm   207 EFLPLTENGKGGGVIQSSASECNFVTLLAARFEVMKELRQRFPFVEEGLLLSKLIAYCSKEAHSS 271

  Fly   195 VEKATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEIGK 259
            ||||..:.:|||||::.|...|:|.|.||.|||.|.|.||.||||..|:|||..|:||.::|||.
 Worm   272 VEKACMIGMVKLRILETDSKFRLRGDTLRNAIQEDRNLGLIPFFVSTTLGTTSCCSFDVLSEIGP 336

  Fly   260 VCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMNLK 324
            :|:: :.:|||||.||:|::||.||.|....|:|||.||||||||.||.|||.|.:||||...|.
 Worm   337 ICKE-NELWLHVDAAYSGSAFICPEFRPLMNGIEYAMSFNTNPNKWLLINFDCSTMWVRDRFKLT 400

  Fly   325 SALNVNPLYLRHEHL-TGVDYRHYGIPLSRRFRALKLWFVFRTYGIRGLQEYIRNHMALAKKFEM 388
            .||.|:||||:|..: ..:||||:|||||||||:||||||.|.|||.|||:|||.|:.||||.|.
 Worm   401 QALVVDPLYLQHSWMDKSIDYRHWGIPLSRRFRSLKLWFVIRMYGIDGLQKYIREHVRLAKKMET 465

  Fly   389 LVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQINHSGKMHMTPAKFNGRYVIRFCVTYEHA 453
            |:|.|.:||:.|:|.:|||||||:..||.|..||.::|.||::||.||....|:||||||..|:|
 Worm   466 LLRADAKFEIVNEVIMGLVCFRMKGDDELNQTLLTRLNASGRIHMVPASLGDRFVIRFCVCAENA 530

  Fly   454 TEKDILEAWTQIKCFAEEILRDHQLESSSVPTTPEGSERTSSEPLAP---VAGKPPIKKRLTRTK 515
            |:|||..|:..|....:.:|.|    |.......|..|..:.|.:..   :...|  :|.|||..
 Worm   531 TDKDIEVAYEIIAQATQHVLHD----SVKAVIAEEDEEAVALEEMVADLNITETP--EKCLTRQN 589

  Fly   516 SLRFS-----FTRSISREQYQSQSEH 536
            |...:     ..|.:|:|:..:|.:|
 Worm   590 SANAAESGQKLERQLSKEEILAQKQH 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 217/378 (57%)
tdc-1NP_495743.1 Pyridoxal_deC 111..489 CDD:278699 217/378 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.815392 Normalized mean entropy S2516
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - O PTHR11999
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X696
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.880

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