DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc1 and DDC

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_000781.2 Gene:DDC / 1644 HGNCID:2719 Length:480 Species:Homo sapiens


Alignment Length:478 Identity:234/478 - (48%)
Similarity:327/478 - (68%) Gaps:6/478 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVEEFRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM 65
            |:..|||:.|||::||:..|...||.|.|.|.::||||:.|:||.|||.|:.|:|::.|.|:.||
Human     1 MNASEFRRRGKEMVDYMANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDVEKIIM 65

  Fly    66 PGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPK 130
            |||.||:.|.||||||:.:|:|::|.|||..|||.||||||:.||..||||::|:|..|.|.|||
Human    66 PGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELPK 130

  Fly   131 AFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQT-SVHDSVFLPSLIAYASREAHSS 194
            ||:::..|. |||.:||||||..||:|:.||.:.|..|:..: .:..:..:..|:||:|.:||||
Human   131 AFLNEKAGE-GGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEKLVAYSSDQAHSS 194

  Fly   195 VEKATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEIGK 259
            ||:|..:..|||:.|.:|.:..||...|::|::.|..|||.|||:|||:|||..|:||::.|:|.
Human   195 VERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGP 259

  Fly   260 VCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMNLK 324
            :|.: ..||||||.||||::||.||.|....|:|:|||||.||:|.||.|||.||:||:...:|.
Human   260 ICNK-EDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRTDLT 323

  Fly   325 SALNVNPLYLRHEHLTG---VDYRHYGIPLSRRFRALKLWFVFRTYGIRGLQEYIRNHMALAKKF 386
            .|..::|.||:|.|...   .||||:.|||.||||:||:|||||.||::|||.|||.|:.|:.:|
Human   324 GAFRLDPTYLKHSHQDSGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEF 388

  Fly   387 EMLVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQINHSGKMHMTPAKFNGRYVIRFCVTYE 451
            |.|||:|.|||:..:|.|||||||::..::.|..||.:||.:.|:|:.|.....::|:||.:...
Human   389 ESLVRQDPRFEICVEVILGLVCFRLKGSNKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSR 453

  Fly   452 HATEKDILEAWTQIKCFAEEILR 474
            ......:..||..||..|.::||
Human   454 TVESAHVQRAWEHIKELAADVLR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 201/380 (53%)
DDCNP_000781.2 Pyridoxal_deC 35..414 CDD:365998 201/380 (53%)
2 X approximate tandem repeats 58..178 63/120 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.815392 Normalized mean entropy S2516
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100572
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.680

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