DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and Gad1

DIOPT Version :9

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_032103.2 Gene:Gad1 / 14415 MGIID:95632 Length:593 Species:Mus musculus


Alignment Length:433 Identity:110/433 - (25%)
Similarity:180/433 - (41%) Gaps:55/433 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEFRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPA------DAPQSPEPFKDVLEDFEQ 62
            |:..::..||:|.:..|.....:|. ...||..:..:||..      :....||..:.:|.|...
Mouse   110 EQTAQFLLEVVDILLNYVRKTFDRS-TKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRD 173

  Fly    63 KIMPGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALG 127
            .:..| |...||:||....:|.....:.|:.|:|...:..|::...|....:|.|.:....:.:|
Mouse   174 TLKYG-VRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVG 237

  Fly   128 LPKAFVSDAPG-STGGGALQGSASECVLVSLITARARAISEL--KGQTSVHDSVFLPSLIAYASR 189
            ...   .|..| .:.|||:..      :.|::.||.:...|:  ||..:|      |.|:.:.|.
Mouse   238 WSN---KDGDGIFSPGGAISN------MYSIMAARYKYFPEVKTKGMAAV------PKLVLFTSE 287

  Fly   190 EAHSSVEKA--------TKMALVKL----RIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVAT 242
            .:|.|::||        ..:.|:|.    :||.||         |...|.:....|..|.:|.||
Mouse   288 HSHYSIKKAGAALGFGTDNVILIKCNERGKIIPAD---------LEAKILDAKQKGYVPLYVNAT 343

  Fly   243 VGTTGGCAFDDITEIGKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLL 307
            .|||...|||.|.||..:|.:. ::|||||.|:.|...:..:.|...:|:|.|:|...||:|::.
Mouse   344 AGTTVYGAFDPIQEIADICEKY-NLWLHVDAAWGGGLLMSRKHRHKLSGIERANSVTWNPHKMMG 407

  Fly   308 TNFDASALWVRDVMNLKSALNVNPLYL---RHEHLTGVDYRHYGIPLSRRFRALKLWFVFRTYGI 369
            .....||:.|::...|:....:...||   ..::....|.....|...|.....|.|.:::..|.
Mouse   408 VLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGT 472

  Fly   370 RGLQEYIRNHMALAKKFEMLVRKDERFEVRND---VHLGLVCF 409
            .|.:..|...:.||......::..|.||:..|   .|.. |||
Mouse   473 VGFENQINKCLELADYLYAKIKNREEFEMVFDGEPEHTN-VCF 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 102/402 (25%)
Gad1NP_032103.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Pyridoxal_deC 143..517 CDD:365998 102/399 (26%)
Substrate binding. /evidence=ECO:0000250 189..191 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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