DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc1 and gad1.2

DIOPT Version :10

Sequence 1:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_012819752.1 Gene:gad1.2 / 100145511 XenbaseID:XB-GENE-5830282 Length:554 Species:Xenopus tropicalis


Alignment Length:451 Identity:110/451 - (24%)
Similarity:182/451 - (40%) Gaps:83/451 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YICQYGTNIEERDVAPT--------------------------------LDPGYLKKLLPA---- 44
            ||..: :||...|:.||                                ||..:..:||..    
 Frog    51 YISDF-SNIYSTDLLPTRNGEKCTEQFLIEVLRILLNHIKKTYDGESKVLDFHHPHQLLEGLEGF 114

  Fly    45 --DAPQSPEPFKDVLEDFEQKIMPGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWAS 107
              :....|||.:.:|.|....:... :...||::|.....|.....:.|:.|::...:..|::..
 Frog   115 NLELSDQPEPLEQILVDCSDTLKYS-IKTGHPRYFNQLSCGLDIIGLAGEWLTATANTNMFTYEI 178

  Fly   108 CPAAAELETIVMNWYAKALGLPKAFVSDAPGSTGGGALQGSASECVLVSLITARAR--AISELKG 170
            .|....:|.||:....:.:|..:   ::|.|....|   |:.|.  |.||..||.:  .:.:.||
 Frog   179 APVFIIMEEIVLKKMQEIIGWGE---NEADGIFSPG---GTISN--LYSLQAARYKYFPMVKTKG 235

  Fly   171 QTSVHDSVFLPSLIAYASREAHSSVEKATKMALV---KLRIIDADEHGRMRVDLLRQAIQNDVNA 232
            ..:      ||.::.:.|.::|.|.:||:.:..:   .:..|..||.|:|....|...|......
 Frog   236 MAA------LPQIVIFTSEQSHYSFKKASAILGIGTDNVIAIKCDERGKMIPSDLEDKILKAKRQ 294

  Fly   233 GLTPFFVVATVGTTGGCAFDDITEIGKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADS 297
            |..||:|.||.|||...|||.:..|..:|::. .:|:|||.|:.|...:..:.|....|:|.|:|
 Frog   295 GQHPFYVSATAGTTVYGAFDPLITIADICKRY-GLWMHVDAAWGGGLLLSKKHRYKMNGIERANS 358

  Fly   298 FNTNPNKLLLTNFDASALWVRDVMNLKSALN---VNPLY-LRHEHLTGVDYRHYGIPLSRRFRAL 358
            ...||:|::......||:.:|. ..|..|.|   .:.|: :...:.|..|.....|...|.....
 Frog   359 VTWNPHKIMGVPLQCSAILIRQ-KGLLQACNQQCADYLFQMDKPYDTAYDTGDKTIQCGRHVDIF 422

  Fly   359 KLWFVFRTYGIRG----------LQEYIRNHMALAKKFEMLVRKDERFEVRNDVHLGLVCF 409
            |||.:::..|..|          |.||:.|.:.....||::.|  ::.|..|      |||
 Frog   423 KLWLMWKAKGSCGFELQINRCLELSEYLYNKLQSKSNFELVFR--DKPEYTN------VCF 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:395219 101/400 (25%)
gad1.2XP_012819752.1 Pyridoxal_deC 104..478 CDD:395219 101/397 (25%)

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