DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17266 and Ppie

DIOPT Version :10

Sequence 1:NP_610224.1 Gene:CG17266 / 35571 FlyBaseID:FBgn0033089 Length:183 Species:Drosophila melanogaster
Sequence 2:NP_001382655.1 Gene:Ppie / 298508 RGDID:1311411 Length:301 Species:Rattus norvegicus


Alignment Length:171 Identity:92/171 - (53%)
Similarity:113/171 - (66%) Gaps:6/171 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RSSNNPVVFFDIAVGTTEIGRMIFELFADTVPRTAENFRQFCTGEYRPDGVPIGYKGASFHRVIK 76
            ::.:||.|:.||.:|....||:...|.:|.||.||||||..||.|     ...|:||:||||:|.
  Rat   135 KARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHE-----KGFGFKGSSFHRIIP 194

  Fly    77 DFMIQGGDFVQGDGTGVTSIYGNTFGDENFTLKHDSPGLLSMANSGKETNGCQFFITCAKCNFLD 141
            .||.|||||...:|||..||||..|.||||.|||..||||||||||..|||.|||:||.|.::||
  Rat   195 QFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLD 259

  Fly   142 GKHVVFGRVLDGLLIMRKIENVPTGPNNKPKLPVTISQCGQ 182
            |||||||.:.|||.::|:|| .....:.|||..|.|:.||:
  Rat   260 GKHVVFGEITDGLDVLRQIE-AQGSKDGKPKQKVIIADCGE 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17266NP_610224.1 cyclophilin_ABH_like 17..181 CDD:238907 89/163 (55%)
PpieNP_001382655.1 RRM_PPIE 8..82 CDD:409783
cyclophilin_ABH_like 140..298 CDD:238907 89/163 (55%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.