DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGAP3 and PGAP3

DIOPT Version :9

Sequence 1:NP_610223.1 Gene:PGAP3 / 35570 FlyBaseID:FBgn0033088 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_219487.3 Gene:PGAP3 / 93210 HGNCID:23719 Length:320 Species:Homo sapiens


Alignment Length:314 Identity:126/314 - (40%)
Similarity:182/314 - (57%) Gaps:12/314 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IVLLLGALVTACLASNGDRTQFFHNCRQNCERTNCSADGLEIQEQAVKFYQQSVFDRLFQWSCAD 73
            :|||.||...|. .|.|||...:.:|...||..|||...|.....     :|.::..|..|:|.|
Human     8 LVLLAGAAALAS-GSQGDREPVYRDCVLQCEEQNCSGGALNHFRS-----RQPIYMSLAGWTCRD 66

  Fly    74 ECQYGCMWRTVFAFFERGWPIPQFYGKWPFLRLLGMQEPASVIFSCLNFVVHLRLLRKFRREVRP 138
            :|:|.|||.||..:.:.|..:|||:|||||.|.|..|||||.:.|.||.:..|.:|.::|..|..
Human    67 DCKYECMWVTVGLYLQEGHKVPQFHGKWPFSRFLFFQEPASAVASFLNGLASLVMLCRYRTFVPA 131

  Fly   139 DSPCYMLTHIFAVTSLNGWIWSAIFHTRDFPLTELLDYAFAYSIILCSLYVMVMR---MLHRYSL 200
            .||.|.....||..|||.|.||.:|||||..|||.:||..|.::||.|:|:..:|   :.|...:
Human   132 SSPMYHTCVAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVV 196

  Fly   201 FLRGVITLAFLSYYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRILR 265
            .....:.|..|:.::   :|||:.||:|.:|::.|||.|::..|.|..||.:.:.|.|:.|:.:.
Human   197 SAFRALLLLMLTVHV---SYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVV 258

  Fly   266 FYILMALAMSLELLDFPPILWILDAHALWHLATIPLASLYYDFMIEDCRTLRKE 319
            ..:|:.....||||||||:.|:|||||:||::|||:..|::.|:.:|...|.||
Human   259 VVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDSLYLLKE 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGAP3NP_610223.1 Per1 65..313 CDD:282000 104/250 (42%)
PGAP3NP_219487.3 Per1 54..306 CDD:321836 104/254 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144507
Domainoid 1 1.000 213 1.000 Domainoid score I2767
eggNOG 1 0.900 - - E1_COG5237
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5484
Inparanoid 1 1.050 237 1.000 Inparanoid score I3388
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59972
OrthoDB 1 1.010 - - D523376at33208
OrthoFinder 1 1.000 - - FOG0004451
OrthoInspector 1 1.000 - - oto90070
orthoMCL 1 0.900 - - OOG6_104144
Panther 1 1.100 - - LDO PTHR13148
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R898
SonicParanoid 1 1.000 - - X3155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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