DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGAP3 and AT5G62130

DIOPT Version :9

Sequence 1:NP_610223.1 Gene:PGAP3 / 35570 FlyBaseID:FBgn0033088 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001190592.1 Gene:AT5G62130 / 836333 AraportID:AT5G62130 Length:345 Species:Arabidopsis thaliana


Alignment Length:314 Identity:94/314 - (29%)
Similarity:148/314 - (47%) Gaps:30/314 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NCRQNCERTNC-----------SADGLEIQEQAVKFYQQSVFDRLFQWSCADECQYGCMWRTVFA 86
            :|...|::|.|           ||||..|  ....:.|:.::.|..||.|..:|||.||......
plant    36 SCVDQCQKTGCVGDTCFQHCKFSADGKAI--DGPWYMQEPLYLRWKQWDCQSDCQYECMMTREEE 98

  Fly    87 FFERGWPIPQFYGKWPFLRLLGMQEPASVIFSCLNFVVHLR------LLRKFRREVRPDSPCYM- 144
            ....|....:::||||...:.|:|||.||.||.|:..:..:      :|..::..::|:...|. 
plant    99 RKRNGERPTKYFGKWPLKHVYGIQEPVSVAFSALDLAMQFQGWVSYFILVYYKLPLQPNRKTYYE 163

  Fly   145 ---LTHIFAVTSLNGWIWSAIFHTRDFPLTELLDYAFAYSIILCSLYVMVMRMLHRYSLFLRGVI 206
               :.||:|:..:|...||:|.|:||..|||.|||:.|..:...||.:.::|........::.::
plant   164 YNGIVHIYAIIVMNSLFWSSICHSRDVELTERLDYSSATVLAGFSLILAILRSFSIQDQSVKIMV 228

  Fly   207 TLAFLSYYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRILRFYILMA 271
            |...|:....:..||:....:...:..|....|.|..|.|.:|.  ..|..|...::..|.|...
plant   229 TAPILAVVATHILYLNFYNLDEGLHWKVIFGIGGIELVVWGLWA--ALTSHPSKWKLRAFLISSI 291

  Fly   272 LAMSLELLDFPPILWILDAHALWHLATIPLASLYYDFMIEDC--RT---LRKEK 320
            |.:.|.:.||||....:||||||..|.|||:.|::.|:.:|.  ||   |:|.|
plant   292 LTLCLRMFDFPPYKGYIDAHALWRGAGIPLSYLWWSFVCDDAVFRTTVNLKKSK 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGAP3NP_610223.1 Per1 65..313 CDD:282000 78/257 (30%)
AT5G62130NP_001190592.1 Per1 73..333 CDD:282000 78/261 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 158 1.000 Domainoid score I1294
eggNOG 1 0.900 - - E1_COG5237
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I1535
OMA 1 1.010 - - QHG59972
OrthoDB 1 1.010 - - D828384at2759
OrthoFinder 1 1.000 - - FOG0004451
OrthoInspector 1 1.000 - - otm3272
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13148
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.940

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