DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGAP3 and SPAC823.07

DIOPT Version :9

Sequence 1:NP_610223.1 Gene:PGAP3 / 35570 FlyBaseID:FBgn0033088 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_593834.1 Gene:SPAC823.07 / 2543664 PomBaseID:SPAC823.07 Length:331 Species:Schizosaccharomyces pombe


Alignment Length:297 Identity:100/297 - (33%)
Similarity:153/297 - (51%) Gaps:12/297 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ASNGDRTQFFHNCRQNCERTNCSADGLEIQEQAVKFYQQSVFDRLFQWSCADECQYGCMWRTVFA 86
            ||.||....:.:|...|....|..:..:..:..:..       :||:|.|...|.|.|.......
pombe    24 ASAGDLHPVYVSCVNRCIENKCHGNPSDTSKLPLDL-------KLFRWDCGSNCGYECEITAENY 81

  Fly    87 FFERGWPIPQFYGKWPFLRLLGMQEPASVIFSCLNFVVHLRLLRKFRREVRPDSPCYMLTHIFAV 151
            |.....|..|::|||.|:|:.|:||..||.||.|||::|.......||.:..:.|...|...:|:
pombe    82 FAAHNLPSQQYHGKWYFIRVFGIQELFSVFFSMLNFMIHYNGYHIMRRCIPDEHPAKRLCLSWAI 146

  Fly   152 TSLNGWIWSAIFHTRDFPLTELLDYAFAYSIILCSLYVMVMRMLHRYSL----FLRGVITLAFLS 212
            ..:|.|:||::||.||.|:||.|||..|.:.:|...|..::.||....|    .|..:|.:.|::
pombe   147 VGMNAWVWSSVFHIRDTPITEKLDYFSAGAFVLFGSYCTLILMLRLDQLPGGKLLCWIIGVIFIA 211

  Fly   213 YYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRILRFYIL-MALAMSL 276
            .:|.:.:|||...|:|.:||..|||.|::..:.|:.:....|....|:.|...:.:. :.||.||
pombe   212 AFIAHVSYLSFYSFDYGYNMKANVAVGLVQNILWYYYSWSNRNSGLYWTRWPAYIVTSLMLATSL 276

  Fly   277 ELLDFPPILWILDAHALWHLATIPLASLYYDFMIEDC 313
            ||.||.||..::||||||||:|:|:....|.|::..|
pombe   277 ELFDFSPIANLIDAHALWHLSTVPITHYLYGFVVRKC 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGAP3NP_610223.1 Per1 65..313 CDD:282000 92/252 (37%)
SPAC823.07NP_593834.1 PER1 9..319 CDD:227562 100/297 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 176 1.000 Domainoid score I847
eggNOG 1 0.900 - - E1_COG5237
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5484
Inparanoid 1 1.050 180 1.000 Inparanoid score I1126
OMA 1 1.010 - - QHG59972
OrthoFinder 1 1.000 - - FOG0004451
OrthoInspector 1 1.000 - - oto101293
orthoMCL 1 0.900 - - OOG6_104144
Panther 1 1.100 - - LDO PTHR13148
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R898
SonicParanoid 1 1.000 - - X3155
TreeFam 1 0.960 - -
1413.860

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