Protein Alignment PGAP3 and pgap-3

DIOPT Version :10

• Sequence 1: NP_610223.1
• Gene: PGAP3 / 35570
• FlyBaseID: FBgn0033088
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: NP_504567.1
• Gene: pgap-3 / 187504
• WormBaseID: WBGene00019806
• Length: 320
• Species: Caenorhabditis elegans
• Alignment Length: 332
• Identity: 110/332 - (33%)
• Similarity: 167/332 - (50%)
• Gaps: 67/332 - (20%)

  Fly    12 LLGALVTACL----ASNGDRTQFFHNCRQNC-ERTNCSADGLEIQEQAVKFYQQSVFDRLFQWSC 71
            ::|.|:..|.    ||.|||:.::..|.|.| .:.|||          .||       ....|:.
 Worm     6 VVGCLLITCFVQLEASPGDRSIWYQECTQVCISKYNCS----------TKF-------GTLDWAR 53

  Fly    72 AD--ECQYGCMWRTVFAFFERGWPIPQFYGKWPFLRL---LG--MQEPASVIFSCLNFVVHLRLL 129
            .|  .|:|.|||.|:..|......:|||:||||||.:   .|  :|||||:|||.||.....::|
 Worm    54 GDCFWCRYDCMWDTIGHFDSNFGVVPQFHGKWPFLAIPLPFGFIIQEPASMIFSLLNLFTVYKML 118

  Fly   130 RKFRR-EVRPDSPCYMLTHIFAVTSLNGWIWSAIFHTRDFPLTELLDYAFAYSIILCSLYVMVMR 193
            |:|:: :..|:...::   ::|...:..||.|::||..|...||.:||..|||.:|.:|||.|
 Worm   119 RRFKKMQNLPNRTMWL---VYAHVGMFTWISSSLFHMFDCDFTEKMDYFGAYSFVLFALYVSV-- 178

  Fly   194 MLHRYSLFL-RG---VITLAFLSYYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVR 254
            :..:...|| ||   .|.:.|...|:|:|..: :..|:|.:||...:...:|..      |.:|
 Worm   179 IFTKQLQFLGRGGPKYIQILFALVYLNHFMKM-MQNFDYGYNMTCCIVFSLITT------CLYV- 235

  Fly   255 TRRPYFRR------------ILRFYILMALAMSLELLDFPPILWILDAHALWHLATIPL------ 301
             ...|:|:            ::|..|...|:.:||:|||.|:.||.|:|:|:||||||:
 Worm   236 -HHLYYRKRNLGSLQESDIVLIRLIIWANLSTALEILDFTPVFWIFDSHSLFHLATIPIPIWWSD 299

  Fly   302 -ASLYYD 307
             .:||||
 Worm   300 FLALYYD 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGAP3	NP_610223.1	Per1	65..313	CDD:461161	94/274 (34%)
pgap-3	NP_504567.1	Per1	48..301	CDD:461161	90/266 (34%)